PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00011g00821.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ZF-HD
Protein Properties Length: 200aa    MW: 22659 Da    PI: 10.7194
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00011g00821.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer55.41.5e-172072558
               ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                               Y eC++N      ++a+DGC+ f p     gt++al+C  CgCH nF Rr ++
  Peaxi162Scf00011g00821.1 20 LYGECMRNRSTGSMTYATDGCQGFAPG-YPLGTIEALRCQTCGCHQNFRRRLET 72
                              6*************************8.4559******************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.2E-152070IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-72169IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152316.7692170IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MLRIRANKTW ANRRSRSLPL YGECMRNRST GSMTYATDGC QGFAPGYPLG TIEALRCQTC  60
GCHQNFRRRL ETRHPQQQVY DGTHISYSPP STIIPLPQPP PATQPDVAPA VDPAMKELNP  120
NANSSSHSLR EVVQKVKKKW MREQWKKLAS SKSLLPPVPP GPPLRVYHMR RRDIIKARIA  180
AKNNYEGGSS SKRRPCSYDY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.11e-11mini zinc finger 1