PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00011g00819.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family TCP
Protein Properties Length: 426aa    MW: 45251 Da    PI: 9.777
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00011g00819.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.61.5e-401312352112
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 
                               ++ k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  + s +ss+s+ 
  Peaxi162Scf00011g00819.1 131 PPPKRATKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTL 215
                               567999***************************************************************9997777777777744 PP

                       TCP  86 ssgkaaksaakskksqksaasalnlak 112
                               s++       +sk++++s +sal+la+
  Peaxi162Scf00011g00819.1 216 SAP-------PSKSAPHSFHSALALAA 235
                               444.......33444444444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.7E-39136237IPR005333Transcription factor, TCP
PROSITE profilePS5136928.542137191IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MELTDLQNNN TNSTSKQNSS TNNTTAQPLH QQYHQLIHHH QHLQQQHGRS SSVPFAQPAG  60
PTSSLAAAAS PSPTSASASS PSPQQQQPPH LVDASLAIAT RSDSLTDPTK KLQQQQQQQS  120
IQQAPQQPPP PPPKRATKDR HTKVDGRGRR IRMPAACAAR VFQLTRELGH KSDGETIEWL  180
LQQAEPAIIA ATGTGTIPAN FSTLNISLRS SGSTLSAPPS KSAPHSFHSA LALAAAHHPA  240
HPFEEGFSHM LGFHQNPHLL TPSQIQETIQ GGGAGGGSSG DGGGQEGTEN YLRKRYREDL  300
FKEEGSSNPQ GEASGGSTSP SNKQFKGNSS QLSKPSQEGV VGPSSSMLRH TNMMPATGLW  360
TVTPPPSGTT GSPFWMLPVT ASGSVQTLSA PMASTSGTTT LESQMWPFPM GNSNTIQAPL  420
HFMPRF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795828.10.0PREDICTED: transcription factor TCP8-like
TrEMBLA0A1U7XY290.0A0A1U7XY29_NICSY; transcription factor TCP8-like
STRINGXP_009795828.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114842125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.14e-54TCP family protein