PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00003g00523.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 517aa    MW: 57868.6 Da    PI: 6.9718
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00003g00523.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.7e-10213253441
                               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                                k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  Peaxi162Scf00003g00523.1 213 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 253
                               6889************************9733355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.0E-8206258No hitNo description
SMARTSM003388.3E-6210273IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163212256IPR004827Basic-leucine zipper domain
PfamPF001701.8E-7213253IPR004827Basic-leucine zipper domain
CDDcd147082.51E-21214266No hitNo description
SuperFamilySSF579592.25E-6214256No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
PfamPF141448.5E-32295370IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MESQRIGDTA SLSADHSGPS HHHHHNMSYA LLRGLNPTNT TSFMYHSTPN NQEPPAFDFG  60
ELEEAIVLQG VKMSNDETKA SLYAATNRPA ATLEMFPSWP TRFHHTPRGS SKSGEESTDS  120
GSALNTFSSR GEHHLEPESP ISRKQSSDHH QTIEQNQQLQ IPQLQLPQQH QQLQEMASDS  180
PRTVVSNSTE PASKPNYEKR KGAGSTSDRV TDAKTLRRLA QNREAARKSR LRKKAYVQQL  240
ETSRIRLAQL EQELQRARSQ GLFMGGGAAA NSNISSGAAI FDMEYSRWLD DDQRHIAELR  300
TALQAHLGDA DLRVIVDGYI AHYDEIFRLK GVAAKSDVFH LITGIWTTPA ERCFLWMGGF  360
RPSELIKMLI AQLDPLTQQQ VVGIYSLQQS SQQAEEALSQ GLEQLQQSLV ETVASDSVND  420
GMHHMAVALG KLANLEGFVR QADNLRQQTL HQLHRILTVR QAARCFLVTG EYYGRLRALS  480
SLWASRPRET MIVDDNSCQT TTELQMIQAS QHHFSNM
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019267195.10.0PREDICTED: transcription factor TGA2.2-like
RefseqXP_019267203.10.0PREDICTED: transcription factor TGA2.2-like
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1J6IMX90.0A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRINGXP_009613713.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-177bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]