PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_81710g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family TCP
Protein Properties Length: 182aa    MW: 19973.5 Da    PI: 9.6118
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_81710g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.62.3e-3431102371
            TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...s 71 
                    +k+ +++++hTkv+gR+RRvR++a  aar+F+L++eLG+++d++ti+WLl++a+pai ++tgt++ +a   s
  MA_81710g0010  31 AKRPSTKDRHTKVNGRGRRVRIPAASAARIFQLTRELGHKSDGETIQWLLNKAEPAIMAATGTGTVPAlpmS 102
                    6999***********************************************************888874331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.6E-2835115IPR005333Transcription factor, TCP
PROSITE profilePS5136925.8713690IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MSSEEVQNQS EQRLLQEGPQ NNNPARKTLV AKRPSTKDRH TKVNGRGRRV RIPAASAARI  60
FQLTRELGHK SDGETIQWLL NKAEPAIMAA TGTGTVPALP MSIVGPVSSY PSKLQQHPQT  120
PPSVHGILAL PAFGSSDGMG FEFQGGQLSH RPYTSMLWGS EDQALDEHRI DHSLKQSNCH  180
CY
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ0617411e-101FJ061741.2 Pinus taeda isolate 4660 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617421e-101FJ061742.2 Pinus taeda isolate 4644 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617431e-101FJ061743.2 Pinus taeda isolate 4654 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617441e-101FJ061744.2 Pinus taeda isolate 4659 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617451e-101FJ061745.2 Pinus taeda isolate 4649 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617461e-101FJ061746.2 Pinus taeda isolate 4655 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617471e-101FJ061747.2 Pinus taeda isolate 4656 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617481e-101FJ061748.2 Pinus taeda isolate 4643 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617491e-101FJ061749.2 Pinus taeda isolate 4646 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617501e-101FJ061750.2 Pinus taeda isolate 4658 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617511e-101FJ061751.2 Pinus taeda isolate 4651 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617521e-101FJ061752.2 Pinus taeda isolate 4652 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617531e-101FJ061753.2 Pinus taeda isolate 4645 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617541e-101FJ061754.2 Pinus taeda isolate 4647 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617551e-101FJ061755.2 Pinus taeda isolate 4657 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617561e-101FJ061756.2 Pinus taeda isolate 4650 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617571e-101FJ061757.2 Pinus taeda isolate 4648 anonymous locus 0_17202_02 genomic sequence.
GenBankFJ0617581e-101FJ061758.2 Pinus taeda isolate 4653 anonymous locus 0_17202_02 genomic sequence.
GenBankJQ2622021e-101JQ262202.1 Pinus radiata isolate 4661 hypothetical protein (0_17202_02) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541424.12e-42transcription factor TCP11
RefseqXP_028196567.12e-42transcription factor TCP11-like
TrEMBLH9MA791e-49H9MA79_PINRA; Uncharacterized protein (Fragment)
TrEMBLH9W0S81e-49H9W0S8_PINTA; Uncharacterized protein (Fragment)
STRINGGLYMA13G20710.29e-42(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9221459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.12e-37TCP family protein