PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_75070g0010
Common NameAP2L2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family AP2
Protein Properties Length: 371aa    MW: 41167.2 Da    PI: 8.7546
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_75070g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.29.5e-144292155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   s+y+GV+ +k  grW+A+   +     +k+++lg f+++e+Aa+a+++a+ + +g
  MA_75070g0010 42 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEEDAARAYDKAAIRCNG 92
                   89********.7******5553..2.26**********************98766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.64E-2642102No hitNo description
SuperFamilySSF541711.31E-1742101IPR016177DNA-binding domain
PfamPF008474.3E-94292IPR001471AP2/ERF domain
PROSITE profilePS5103216.02843100IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-1643100IPR001471AP2/ERF domain
SMARTSM003804.8E-3343106IPR001471AP2/ERF domain
PRINTSPR003674.3E-64455IPR001471AP2/ERF domain
PRINTSPR003674.3E-682102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MKSRLVPTHS LLLSIIQTSK LSKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG  60
QFLGKKYIYL GLFDSEEDAA RAYDKAAIRC NGKDAVTNFD PSSYENEILE EGRESQTSTG  120
FDQNLDLSLG IGHVTTQLKI SPSYKSRVEE DSQLNRIEAV TYSNLSQDSK ILSCLTSKGA  180
ENAVPEFQSL PRGHAVYWNS QTLQVPDAMK HKQSHTREDN AYEQTAISGS QLYPDHLSNC  240
KRLNMEGLKE QSLGVPSSTV SFWPMKQQSG WTWQLHASGP TTPVFTTNRS PASGFSPQIH  300
TAFVPSTHGC HKMGVHWAAQ STDPCMVQTP SPHLATRLTS GPDSGDHPVG LTLDLPGKKI  360
KRSSVQRDKV D
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF2539710.0AF253971.1 Picea abies APETALA2-related transcription factor 2 (AP2L2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLQ9FV330.0Q9FV33_PICAB; APETALA2-related transcription factor 2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4971784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.22e-55AP2 family protein
Publications ? help Back to Top
  1. Vahala T,Oxelman B,von Arnold S
    Two APETALA2-like genes of Picea abies are differentially expressed during development.
    J. Exp. Bot., 2001. 52(358): p. 1111-5
    [PMID:11432927]