PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_67041g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family AP2
Protein Properties Length: 386aa    MW: 42654.4 Da    PI: 7.3088
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_67041g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2392.1e-1226761055
            AP2 10 kkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  MA_67041g0010 26 RWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 76
                   579*********766644468557*************************98 PP

2AP225.92.5e-08119165150
            AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaar 50 
                    s+y+G    +++g+W+A+   +   g    +++fslg+  t eeAa+a++   
  MA_67041g0010 119 SKYRGLAKQSQTGKWEAS---F---GrvlGNRYFSLGSCSTSEEAAAAYEMSQ 165
                    79****************...8...555446******************8765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.1871784IPR001471AP2/ERF domain
SMARTSM003802.4E-162390IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-132586IPR016177DNA-binding domain
PfamPF008471.2E-82676IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-122685IPR001471AP2/ERF domain
PfamPF008471.6E-4119163IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-7119179IPR016177DNA-binding domain
PROSITE profilePS5103210.758120178IPR001471AP2/ERF domain
SMARTSM003804.9E-4120184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-4120170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MSNVSSGHST HHQGHKKLIG CKRVLRWTGR YEAHLWDKST WNQNQNKKGK QVYLGAYDEE  60
EAAARAYDLA ALKYWGPGTL INFPVSDYAR DIEEMQSISR EDFLASLRRK SSGFSRGMSK  120
YRGLAKQSQT GKWEASFGRV LGNRYFSLGS CSTSEEAAAA YEMSQGEYRG FGMVRNIDLS  180
SYIRWWQPNK SLEVEPSAPR HMDEAHSMSE ERHTQGDEPE TPQWPGQACE PYQLPSLGVP  240
NNGKHNPSPV TALSILHQSS SFKQMLEKAS AKKGKSDQDM NAGDNPENMQ LEKGKGKNCL  300
AEDTNGSKEF GCHSGAYQPP GQTSTIFPFA QVQSAPPIQE IFPFAQVQSA PPIQDCNTTA  360
PVSDSLWTNF VPTTGGVALA NAVSIC
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ8173570.0KJ817357.1 Larix gmelinii var. olgensis x Larix kaempferi WRI2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021281730.11e-91AP2-like ethylene-responsive transcription factor At2g41710 isoform X1
TrEMBLA0A171PZK20.0A0A171PZK2_9SPER; WRI2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP11217209
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.15e-66AP2 family protein