PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_33594g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 468aa MW: 51128.4 Da PI: 6.8973

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_33594g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	232	287	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ MA_33594g0010 232 KARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 287 68****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-29	229	290	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.977	229	289	IPR017930	Myb domain
SuperFamily	SSF46689	8.96E-18	230	290	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.4E-27	232	287	IPR006447	Myb domain, plants
Pfam	PF00249	1.8E-7	234	285	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence Send to blast
MHLLNDAIAA SKEQLTDCQP SVQAPRPVQQ AGFQFEEEQY NRPVLEELIP IKKRCDESGD 60 ESPENNQNDS KRTKFANECK KEKSSSPEEP LKQHDSQLRS DQEQLFPTNS SLFSDSKQRI 120 GGAFLPFSRE RQSNPSVSAR SNAVKHPPDL ALSSAEQEVG STFRCNETAT MNNVTTMNNV 180 TTTSLSRSKE PTETTVPTPQ KEVVVKPNGG VCAVPTPAAS NATQSGGQSQ RKARRCWSPE 240 LHRRFVNALQ QLGGSQVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PSPSPPTPAS 300 QAPQLVVLGG IWVPPEYAAH AAVAAHQGPG LYGTLSNTTS SHSQSHYCQS PMPQEHYSQM 360 NMSSQLQLPQ PAYCEQQQTP SQSLSSPQGP LQLTGQSSGA RGTSVDGGRE ESVGEDGKSE 420 SSSWKGEEIA KNVEARNMGR GLSLRKQPLQ SVDGDEEDSR GSETTLKF

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence Send to blast

MHLLNDAIAA SKEQLTDCQP SVQAPRPVQQ AGFQFEEEQY NRPVLEELIP IKKRCDESGD  60
ESPENNQNDS KRTKFANECK KEKSSSPEEP LKQHDSQLRS DQEQLFPTNS SLFSDSKQRI  120
GGAFLPFSRE RQSNPSVSAR SNAVKHPPDL ALSSAEQEVG STFRCNETAT MNNVTTMNNV  180
TTTSLSRSKE PTETTVPTPQ KEVVVKPNGG VCAVPTPAAS NATQSGGQSQ RKARRCWSPE  240
LHRRFVNALQ QLGGSQVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PSPSPPTPAS  300
QAPQLVVLGG IWVPPEYAAH AAVAAHQGPG LYGTLSNTTS SHSQSHYCQS PMPQEHYSQM  360
NMSSQLQLPQ PAYCEQQQTP SQSLSSPQGP LQLTGQSSGA RGTSVDGGRE ESVGEDGKSE  420
SSSWKGEEIA KNVEARNMGR GLSLRKQPLQ SVDGDEEDSR GSETTLKF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-14	232	285	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-14	232	285	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-14	232	285	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-14	232	285	1	54	Protein PHOSPHATE STARVATION RESPONSE 1

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT113513	0.0	BT113513.1 Picea glauca clone GQ03411_M24 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A171NYB9	0.0	A0A171NYB9_TAXWC; GARP2

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP4303	16	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-44	G2-like family protein