PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_17614g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Dof
Protein Properties Length: 335aa    MW: 36501.6 Da    PI: 7.8182
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_17614g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.5e-393999262
         zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                   +e+a+kcprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+++
  MA_17614g0010 39 AEQAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNVPVGGGCRKNKRTK 99
                   57899*****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-273797IPR003851Zinc finger, Dof-type
PfamPF027012.5E-334197IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1244397IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104581IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MTRISAWQMN AMQERGLKPP DDIMSCSRPL LDRRLKPHAE QAQKCPRCES TNTKFCYYNN  60
YSLSQPRYFC KTCRRYWTKG GTLRNVPVGG GCRKNKRTKR ASDQPVSSQN DASPSTNTTG  120
CEGPSCPTME EPSSTVPGAS TSIYYSIANE GDELAGYPYA RAPLGGCNSN NNTGSLQPSL  180
APLGSLSSLN ALQSLKSSFP GLDLPSCSRP DQGPLNISDL SCLFEAHHQQ QQMNTSSSLP  240
ISHQQKLGVP LEDGQVNMSP LGENIMEGLR PHQQKLRQNN NAKLEDENIR TSAPPVHWQV  300
PPEGFFEAGG DSGYWNGGGT WPDLSGYGPS SSPLI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1161071e-152BT116107.1 Picea glauca clone GQ03711_P05 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6QVB31e-153A0A0D6QVB3_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP3817445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-34TARGET OF MONOPTEROS 6