PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_26012A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 181aa    MW: 19174.8 Da    PI: 11.8051
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_26012AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.81e-1268118353
                                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                                e++r rrk++NRe+ArrsR+RK+  +eeL+ +++ L a N++L+ +l  l+
  Oropetium_20150105_26012A  68 EVRRLRRKISNRESARRSRARKQRHLEELRARAARLRAGNRELAGRLRGLQ 118
                                689****************************************99998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.1E-960120No hitNo description
SMARTSM003382.1E-966130IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.24368131IPR004827Basic-leucine zipper domain
PfamPF001703.4E-1068119IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.92E-970119No hitNo description
PROSITE patternPS0003607388IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MALALLHVSD PDLELEAFLS EIGFGLATDN VPPPPAHQDA VMTTTVAAAA AATPPEDQQD  60
TSSSAADEVR RLRRKISNRE SARRSRARKQ RHLEELRARA ARLRAGNREL AGRLRGLQAR  120
TALVRLSNDR LRAEGAALGR RLAAAQRAIA LRQIYAAATA ASAAGAGAGF ELQTLASLIV  180
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18289RRSRARKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012700164.12e-44PREDICTED: ocs element-binding factor 1-like
TrEMBLK3ZCP82e-44K3ZCP8_SETIT; Uncharacterized protein
STRINGSi024325m6e-44(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151251919