PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_14977A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 242aa    MW: 26623.8 Da    PI: 10.2436
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_14977AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-1075133563
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  Oropetium_20150105_14977A  75 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTAEN 133
                                9**********************************************999988888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-1571135IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.02473136IPR004827Basic-leucine zipper domain
PfamPF001702.2E-975132IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-1175129No hitNo description
SuperFamilySSF579596.68E-1175126No hitNo description
CDDcd147031.48E-2176125No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MRSLSLDAAL FDGLSLQQGV AGGSGAVAGH KRSGSMDGPT SPFEGESALS GGLPEYAKKA  60
VPSERLAELA LLDPKRAKRI LANRQSAARS KERKIKYTSE LERKVQTLQT EATTLSAQLT  120
LLQRDTSGLT AENRELKLRL QSMEEQAKLR DALNDALREE VQRLKIAAGQ VPNMNRNPFN  180
GGLPQQRQQQ QQQQQQMASY FSQPQQMQYF GSNQVQHHRP NQPQNSSNGG GRCLNDSMDF  240
M*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008668106.11e-132PREDICTED: transcription factor RF2b isoform X1
SwissprotQ9MA754e-61VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0B4J3J11e-132A0A0B4J3J1_MAIZE; Uncharacterized protein
STRINGGRMZM5G821024_P011e-131(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.14e-45VIRE2-interacting protein 1