PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_10889A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 226aa    MW: 23516.1 Da    PI: 6.6913
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_10889AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.1e-11172221554
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                                kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l++
  Oropetium_20150105_10889A 172 KRAKRILANRQSAARSKERKIKYTGELERKVQTLQTEATTLSAQLTLLQN 221
                                9*****************************************99998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-8168225IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.795170221IPR004827Basic-leucine zipper domain
PfamPF001701.0E-9172220IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.34E-11172222No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-11172222No hitNo description
CDDcd147031.73E-23173220No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MDPRFPLPAA PAPSSGGGSR GHHRRAHSET FLRFPDADLF LDPDGDFSLS DLDFPSLSDD  60
SPAISDPTPP PPPPPPQQAA ASAQAAARPP REAHSRSLSL DAAFFEGLAL QGEGGGSSSG  120
GGGGGGHKRS GSMDGVSSPF EGESALSSGL PDYAKKAMPA ERIAELALID PKRAKRILAN  180
RQSAARSKER KIKYTGELER KVQTLQTEAT TLSAQLTLLQ NGNLI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578876.11e-101PREDICTED: transcription factor VIP1-like
SwissprotQ9MA755e-47VIP1_ARATH; Transcription factor VIP1
TrEMBLF2E8Z11e-103F2E8Z1_HORVD; Predicted protein
STRINGBRADI4G41890.11e-100(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.19e-22VIRE2-interacting protein 1