PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_07866A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 381aa    MW: 39560.7 Da    PI: 4.6497
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_07866AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.91.1e-13221271555
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                + +rrkq+NRe+ArrsR RK a + eLe  v++L  eN++L  +l   +++
  Oropetium_20150105_07866A 221 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQK 271
                                679**************************************9888766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-15217281IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.22219273IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-10220273No hitNo description
PfamPF001701.0E-10221270IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-9221270No hitNo description
PfamPF124981.3E-26292373IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MERVFSVEEI PNPYWAPPQP QAPAAGAAAA PVGGGGGGAG GGGGGAGAMN RCPSEWYLEK  60
FLEEEVFDSP GSGTSAGRGL GGVDVVETKP PVGAPVMAST SVVDPVEYNA MLKQKLEKDL  120
AAVAMWRATS TMPPERSGAA STLPNMEVSH AGPLNLIGGN EIPVQSKPAG GPNAGLGPQA  180
IQNPDVLVKQ ATSSSSREQS DDDDMEGEAE TTGNANPVQQ RLQRRKQSNR ESARRSRSRK  240
AAHLNELEAQ VAQLRVENSS LLRRLADVNQ KFNDAAVDNR VLKADVETLR AKGSPSDSTS  300
DAAVPIQDDP NSYFATPSEV GANNTYMPDI ASSTQEDEDF INGALAPGKM GTAASLQRVA  360
SLEHLQKRMC GGPASSGSTS *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002463740.11e-177hypothetical protein SORBIDRAFT_01g005170
TrEMBLA0A0A9DSQ70.0A0A0A9DSQ7_ARUDO; Ohp1
STRINGSb01g005170.11e-176(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.28e-33bZIP family protein