PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_04318A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family bZIP
Protein Properties Length: 351aa    MW: 37890.3 Da    PI: 9.7619
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_04318AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.81.3e-14270321555
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.eleelkke 55 
                                +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k ++e+l+k+
  Oropetium_20150105_04318A 270 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNEELQKkQVEMLEKQ 321
                                79*************************************9964156777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-14261330No hitNo description
SMARTSM003382.8E-13266331IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001268333IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.18E-10270316No hitNo description
CDDcd147079.25E-25270322No hitNo description
PfamPF001709.2E-13270321IPR004827Basic-leucine zipper domain
PROSITE patternPS000360273288IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010187Biological Processnegative regulation of seed germination
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MEFPGRSGRR QQPQPEENLP PMTPLPLARQ GSVYSLTFDE FQSALGGPNK DFGSMNMDEL  60
LRSIWTAEES QAVGASNAVD AAADQAAARG NAIQRQGSLT LPRTLSQKTV DEVWRDMMCF  120
GGPSAATAAA APAPATQRQP TLGEITLEEF LVRAGVVRED MTAGQPTPPI QAPAPPAPPQ  180
PMSQPQMLFP QGNVFAPLVP PPLSLGNGLV TDGGGAAAST LSPVMPGTSN GFGKMDGGDM  240
SSLSPSPVPY VFNGGLRGRK PSAMEKVVER RQRRMIKNRE SAARSRQRKQ AYMMELEAEV  300
AKLKELNEEL QKKQVEMLEK QKNEALERMT RQVGPMAKRI CLRRTLTGPW *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00294DAPTransfer from AT2G36270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954029.11e-166PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotQ6ZDF39e-69TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLK3YTP41e-166K3YTP4_SETIT; Uncharacterized protein
STRINGSb04g034190.11e-158(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.37e-41ABRE binding factor 4