PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100272260051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 284aa    MW: 32186.9 Da    PI: 5.6431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100272260051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-30133191259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +dp++++itY+ eH h+
  Ote100272260051|100272260051 133 SDMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTDPSMFIITYSAEHSHS 191
                                   79*************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-31118193IPR003657WRKY domain
SuperFamilySSF1182904.05E-26126193IPR003657WRKY domain
PROSITE profilePS5081132.34127193IPR003657WRKY domain
SMARTSM007742.8E-35132192IPR003657WRKY domain
PfamPF031061.5E-25134190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MSELVAEMEE DWSLQAIVRG SSGDFGKMEM DGLDSFHQHQ FDQDFTSFQD ILEGSACSSD  60
ELEELYKPFY KAATSFCLPG QSAVVADQDK LQPHDQSPSV TSPVAAVYTP KYKKRKNQQK  120
RVVMQVSAKD VSSDMWAWRK YGQKPIKGSP YPRSYYRCSS SKGCLARKQV EQSCTDPSMF  180
IITYSAEHSH SQPTRRNSLA GTVRQKFPSP KNPKPHKPDS PKIETEAPAA RIIKEEDQET  240
KEGSENIMMS EFVFNEDFFS GLEEFDEFVS HDHFPATARS CSWV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-18122193474WRKY transcription factor 1
5w3x_B1e-18123194880Disease resistance protein RRS1
5w3x_D1e-18123194880Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854209.14e-97PREDICTED: probable WRKY transcription factor 29 isoform X1
RefseqXP_012854210.13e-97PREDICTED: probable WRKY transcription factor 29 isoform X2
TrEMBLA0A0D5Y9B81e-118A0A0D5Y9B8_SALMI; WRKY protein
STRINGMigut.A00718.1.p2e-96(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335