PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100243470021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 327aa    MW: 36269.6 Da    PI: 9.0232
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100243470021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.95.1e-40772092134
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec 73 
                                   ++k+drhski T++g+RdRRvRls+++a++fFdLq++LGfdk+skt++WLl+++k+aikel+++         ssss+sec
  Ote100243470021|100243470021  77 TAKRDRHSKINTAQGPRDRRVRLSISIARKFFDLQEMLGFDKPSKTLDWLLTKSKAAIKELVQNkrndggsgkSSSSPSEC 157
                                   78**************************************************************88888776545555566 PP

                           TCP  74 eaesssssasnsssgkaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                                   e  ss++ a+         s+ k++ ++k+ a ++++ake            t ekm+ik+
  Ote100243470021|100243470021 158 ELISSENGAD---------SKRKNSGKDKQCAVVSSVAKEXXXXXXXXXXXXTLEKMCIKQ 209
                                   3333333333.........445666777777778999999999999999999*****9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.2E-3777177IPR005333Transcription factor, TCP
PROSITE profilePS5136936.17679137IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MLSRNTYLIP QVPSSHQVNL DGVEVLLXXX XXXXXXXXXX XXXXEVFPGL YLAPALDNAA  60
LFNQGEPSSV ALNRKPTAKR DRHSKINTAQ GPRDRRVRLS ISIARKFFDL QEMLGFDKPS  120
KTLDWLLTKS KAAIKELVQN KRNDGGSGKS SSSPSECELI SSENGADSKR KNSGKDKQCA  180
VVSSVAKEXX XXXXXXXXXX TLEKMCIKQF GGCGENGSDL NPSFQCRNNS NNNQLEFLQL  240
SAGNSSNMNL VNPHCHLSSE AATRDLIEES VVIKRKSKNP VFGLNSNYYM VPSATTNENW  300
DVFGFSSQSN LHAILDQHKF INSNSNI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099310.11e-71PREDICTED: transcription factor CYCLOIDEA
TrEMBLA0A096ZGF81e-131A0A096ZGF8_OCIBA; TCP transcription factor (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244