PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100206730021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 287aa    MW: 32911.4 Da    PI: 7.9906
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100206730021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014103126123
                                   EEETTTTEEESSHHHHHHHHHH.T CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                                   ++C++C+k+F+   +L +H  + H
  Ote100206730021|100206730021 103 WRCGYCKKVFRAEKYLDQHFDNrH 126
                                   58*****************77666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280105126IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MEKTRPIYRI CLLIALHLSF AASQSEIAQD TNVAASRNHK EEHHEVHCSR ERSRAAWKIL  60
EEYLTPFVEK EKYQLSSRCR LHPSNDLFRD QEQHKIHVDI NEWRCGYCKK VFRAEKYLDQ  120
HFDNRHNNLL NVSHGKCLAD LCGALHCDYV INSQSRPSKC NPAAAARNRH LCEDLANNCF  180
PMNEGPSVTR LHEFFLRQFC DAHTCSKAGG KPFSRGGMVS EEYKHIVSGD FSTDFDVPSY  240
ILLDRLLVPE RNEKGHDAAK AHLKAQEKTK ALLIAFGKLL GIIHCDN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854614.11e-120PREDICTED: uncharacterized protein LOC105974100
TrEMBLA0A4D8ZKG31e-132A0A4D8ZKG3_SALSN; Uncharacterized protein
STRINGMigut.I00466.1.p1e-116(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80841216