PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100206030081
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 286aa    MW: 31884 Da    PI: 8.3496
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100206030081genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.0001480102123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   y C+ C+k Fs+k  L  H++ H
  Ote100206030081|100206030081  80 YGCNFCPKKFSNKQALGGHQNAH 102
                                   67******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.7E-572106IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.28E-677106No hitNo description
PROSITE profilePS5015710.9780107IPR007087Zinc finger, C2H2
PROSITE patternPS00028082102IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MTLHNKTSKG IPDEEVSGNN RKNKSVMKSC PSLDLNQSLE EIDLQLNTFL NSTDPIKLII  60
TKESERQRVQ PELHDEELEY GCNFCPKKFS NKQALGGHQN AHKIEKVGLK RAREGHMANF  120
GYTGNGFNNG ITSFPFPNSF DQISKMTKGP HYPQYMHQLH AHGYPGSMFP LPHESGMMQP  180
FVGFGGFCSS PKHPLKPQIH SPDYPGSIFP MAHESGVVQP FMGNGFFTSP DMLPFMSSER  240
RMGLGASTSG SRSTVVARND GTGKNKQIKD RAIQHQEDEF DLSLKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A022QDD01e-32A0A022QDD0_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J01383.1.p3e-33(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2289122