PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100194950011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 316aa    MW: 34968.2 Da    PI: 7.8042
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100194950011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP104.32e-32541872102
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................. 65 
                                    g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ +                 
  Ote100194950011|100194950011  54 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLqfpqgsllsmvnashqi 134
                                   689*************************************************************66666666554444444 PP

                           TCP  66 .................ssssasec....eaesssssasnsssg.kaaksaakskksqk 102
                                                    +      +    +++ +sssa+n+ ++   ++++ +  ++q+
  Ote100194950011|100194950011 135 rplddqsnkqgisgklkD------VsaerNQNWESSSADNQDINaYVSTENFSATRQQN 187
                                   443332222222221110......01111222222222222222222222223333333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136932.01956114IPR017887Transcription factor TCP subgroup
PfamPF036343.5E-2756181IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MISRETDFTK QESSTSTTDT AQNFNIINGG ASSSSTSSWS RLRDPRIVRV SRAFGGKDRH  60
SKVCTVRGLR DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV DWLLNAAKHE IDELPPLQFP  120
QGSLLSMVNA SHQIRPLDDQ SNKQGISGKL KDVSAERNQN WESSSADNQD INAYVSTENF  180
SATRQQNPSS LISSLMNTSS SSIPINSFVR WDPSNLTLSQ SHPSRSPGSS PXXXXXXXXX  240
EDWHNFSLVY QPAAGMSAQP YFHSQISASN AEFDAKHLNF QSSLQLSNVE SSTQPARPVQ  300
FNMTANLLPS QNNDGS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099021.11e-101PREDICTED: transcription factor TCP5-like
RefseqXP_011099023.11e-101PREDICTED: transcription factor TCP5-like
TrEMBLA0A103Y4W67e-67A0A103Y4W6_CYNCS; Transcription factor, TCP
STRINGPGSC0003DMT4000034531e-63(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8212499