PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100172330301
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 450aa    MW: 49914.2 Da    PI: 7.0035
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100172330301genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.3e-11146187445
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Ote100172330301|100172330301 146 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 187
                                   6889*************************9777777666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-5143208IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186145189IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-8145189No hitNo description
PfamPF001707.2E-8146188IPR004827Basic-leucine zipper domain
CDDcd147088.65E-22147197No hitNo description
SuperFamilySSF579596.61E-7147190No hitNo description
PROSITE patternPS000360150165IPR004827Basic-leucine zipper domain
PfamPF141441.1E-30228303IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MERNQEGPAF DFGELEEAII LQGVKINNDD TKQPLYSAIR PSATLEMFPS WPMRFQQHTP  60
RGSSKSGEES TDSGSALNTL SNTPESPVSG KLPSDHRQPP PPPPQMDAAG GIDSPRISGS  120
QSQPAAKPTP EKRRGPGSNS DKVLDAKTLR RLAQNREAAR KSRLRKKAYV QQLESSRIKL  180
TQLEQDLQRA RSQGLFLGGG GVASGSVSSG GAIFDMEYVR WLEDDHRHMS EIRTALQANL  240
SDGDLRLIMD GYIAHYDEIF RLKGVAAKSD VFHLITGMWT TPAERCFLWM GGFRPSDLIK  300
MLTPQLDPLT EQQIMGICAL QHSSQQAEEA LSQGLEQLHQ SLIDTIANGS VNDSMHHMAV  360
ALGKLANLEG FVRQADNLRQ QTLHNLHRLL TIRQAARCVL IIGEYYSRLR ALSSLWSSRP  420
RESLIADENS CQTTTDLQMV QSSHSQFSDY
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552198.10.0transcription factor TGA9 isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A4D8ZWL60.0A0A4D8ZWL6_SALSN; Transcription factor TGA
STRINGVIT_06s0080g00360.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]