PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100162540041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 666aa    MW: 74437.9 Da    PI: 8.6013
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100162540041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-057798223
                                  EETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                  kC++C+  F ++ n++rHir+H
  Ote100162540041|100162540041 77 KCEKCSWEFCSPINYRRHIRVH 98
                                  7*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.5387698IPR007087Zinc finger, C2H2
SMARTSM003550.00727698IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    Send to blast
MPAAKLCSSG TLNAMKSEEG NDSLDSFIRQ AIGKEPLLPF PRTVDSPVQW IQLLHALDQP  60
DLPGWPLLTP VKVQMQKCEK CSWEFCSPIN YRRHIRVHRR SLNLNKEWHK NRDLLGAFWD  120
KLLLEQAREV TSFNDIMLKD ISGSSVVKAL SSSLRRPGVW SLPQAYVKAG ATLLDIIQAK  180
PSRLPISSQD LFSILDNASE KTFLCAGTAE SVQKYVFDGE TAKNSLELKN LVALTSFLFE  240
QLLVNAWVAH KDAEALRCQK LLVEEEEAAH KRQALLLERK KQKKLRQKEQ KVREQYYGCS  300
GDLNVYADAL DRPNSNEAFG VSSPSSSNSN SQDVPTTLDS VEPQKRESDE DIEAQFDVSI  360
EHKKQVDSSG ELPMVGAYSH RHVATNRLQV PKSQRSSRYG LHANLNLQTS KPEPMLKLGP  420
STDRSSQNVH KVWTKKLKSN NDGEKLRPPS QEVTSHQIEQ NNEVIIGSIP VTLKSYIDQQ  480
QESFPSEASN VFSTEHVVLK KKNASEKRVA LKLWRPVIRG ETKDVPPVGR SNNDHENGAV  540
LSEAHECTPA SERSGHSQSS GSDGCHNGKQ FLSNDFAQRG FLPFSSEAAK EFLARRWKEA  600
ISGDHIKLVL SSGHEPPDVE HASDPPSSND PSHADNQFGR TIQVHVTRKP EKSVKLKYIP  660
KQKAAA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076143.10.0uncharacterized protein LOC105160463 isoform X1
RefseqXP_020548920.10.0uncharacterized protein LOC105160463 isoform X1
TrEMBLA0A4D9BG750.0A0A4D9BG75_SALSN; Uncharacterized protein
STRINGMigut.F00325.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37222128