PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100156000021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 250aa    MW: 27567.9 Da    PI: 5.442
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100156000021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000483658123
                                  EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                  +kC+dCg sF+++  L  H ++H
  Ote100156000021|100156000021 36 HKCSDCGNSFRTHQALGGHRSSH 58
                                  79**************9999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.87E-53462No hitNo description
PROSITE profilePS5015710.9493663IPR007087Zinc finger, C2H2
PfamPF139122.0E-73659IPR007087Zinc finger, C2H2
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
GPLINLAILE KDKEEGEENL PENQDSGDRV NNSDEHKCSD CGNSFRTHQA LGGHRSSHNK  60
TRSTIFNTXX XXXXXXXXXX XXNRRRKSSS STSNNNKEKA STSSSVTFDI DLNLSPKEDE  120
DDVHAGSDAP SSSTNTRIPA EKEDTPITTG IQEEEKVKIA DGSGFILKGW STTDKRGRPA  180
AADEEDEEVL AAAVQLMKMH EDGVMKLQEK EKTMLKIQEK KPAEKKSGGL KCGECGKFVH  240
IPDHLNSEVK