PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100118440161
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 500aa    MW: 56243.2 Da    PI: 4.865
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100118440161genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00065174188519
                                   TTTEEESSHHHHHHH CS
                       zf-C2H2   5 dCgksFsrksnLkrH 19 
                                   +C++sF+++++L++H
  Ote100118440161|100118440161 174 HCNMSFKSPEDLEKH 188
                                   7************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF495999.15E-5213314IPR008974TRAF-like
PfamPF021763.4E-12216274IPR001293Zinc finger, TRAF-type
PROSITE profilePS5014512.671216267IPR001293Zinc finger, TRAF-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MDPPAEGIEL KPKKLGEEKD GGPVFQCDFC DADIVDKVAQ SFLPGLASAC IDNTMGGLFK  60
TPANVAVEVR KEMVEYLIQR SENFVAESVV LDGGADVQVS ADPYDVISDF IDDFVHSKRN  120
IFSRVSGWLL SEKREDWIDD FVQEMEVNGF WLLNRRLAIA QTLLKNLDFK NAYHCNMSFK  180
SPEDLEKHKW NCDFRTMSCM NEGCDSSCSA VQMDQHDSVC PFKMLPCEQH CSDIIMRREM  240
DRHCITTCPM KLVKCPFHSV GCQSTVPQRT AGQHRSESLS SHLLCVLQVI HKEALSEDLK  300
ERVQELEMLA SPGRLVSARD ARSLTYVVKD LEAKLEPLKV KTDTQRNEEA KNLVDGKEKT  360
HTEAENKSLV DKNEEKTGMP VKQVRFGESS ATPNSHSEGS NGHGKGEQME SSISEREDSS  420
HKMRVLMESS TDTSANEEEV VAINSKDSHS QREEGVSSPP KLDEQMERSF KEEHHAPVIQ  480
QEKLTESITE EGKFAEQTTK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078790.10.0uncharacterized protein LOC105162468 isoform X2
TrEMBLA0A4D8XXK50.0A0A4D8XXK5_SALSN; Homogentisate solanesyltransferase
STRINGMigut.C01187.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA444233