PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100112630031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 171aa    MW: 18795.6 Da    PI: 7.4576
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100112630031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000117395123
                                  EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                  +kC  C k F+++ +L  H ++H
  Ote100112630031|100112630031 73 FKCDVCEKAFPTHQSLGGHRSSH 95
                                  89*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.6E-97296IPR007087Zinc finger, C2H2
SuperFamilySSF576679.21E-67299No hitNo description
PROSITE profilePS5015710.69973100IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.600.0017397IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002807595IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MEHKEAAPSS SKVRIPAVAE EVNKNLSCDL QPNKDSSIVK KLNSSTRRKT EEESEIPATT  60
TPPQNSETAS CRFKCDVCEK AFPTHQSLGG HRSSHNKTRL TIINTNGRFG PVVNRKRKPS  120
SSSSXXXXXX XXXXXXXSAS LSIVFDIDLN LPPKEEEEEE DVVGGSSNQV S
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20502263