PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100096920001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 452aa    MW: 50266.6 Da    PI: 7.562
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100096920001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10147189446
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  Ote100096920001|100096920001 147 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQDLQ 189
                                   6889*************************99888888777765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-6144209IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278146190IPR004827Basic-leucine zipper domain
PfamPF001706.4E-8147189IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.55E-7148191No hitNo description
CDDcd147085.80E-21148194No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-8149192No hitNo description
PROSITE patternPS000360151166IPR004827Basic-leucine zipper domain
PfamPF141445.2E-30229304IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MGMPTHTAFS DSGASHMLHH PNLRAAAFDF GELEEAIILQ GVNINDHDRK QPLYRPAATL  60
EMFPSWPMRF HQPTTRGSSR SGEESTDSVS ATKNTPSNGH RQPPPPQMDA AGGIHSPTIS  120
ASSQPAANST PEKRRGPGSN SDKMLDAKTL RRLAQNREAA RKSRLRKKAY VQQLESSRMK  180
LTQLEQDLQR ARSQGLLLGG GGVASRSISS GGAIFDVEYA RWLDDDQRHM SQIRTALQAN  240
LSDGDLRLIM DGYITHYDEI FHLKGVAAKS DVFHLITGMW TTPAERCFLW MGGFRPSDLI  300
KMLMVQLDPL TEQQIMGICS LQHSSQQAEE ALSQGLEQLH QSLVDTIANC SVNDGTHHMA  360
VALGKMANLE SFVQQADNLR QQTLHNLHRL LTIRQAARCV LVIGEYYSRL RAVSSLWSSR  420
PIESLIADDY SSQTRTELQM VQFSHSQPFS DN
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088884.10.0transcription factor TGA9 isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A4D8ZWL60.0A0A4D8ZWL6_SALSN; Transcription factor TGA
STRINGGorai.006G111800.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]