PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100084160061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 701aa    MW: 78378.4 Da    PI: 9.479
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100084160061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000117798223
                                  EETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                  kC++C++ F ++ n++rH r+H
  Ote100084160061|100084160061 77 KCEKCSREFCSPINYRRHVRVH 98
                                  7*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.4327698IPR007087Zinc finger, C2H2
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MPAAKLCSSG SLNAIKSDDE NDSLDSFIKQ AIGKEPLLPS PRTVDSPVHW IQLLHALDQP  60
DLPGWPLLTP VKVQMQKCEK CSREFCSPIN YRRHVRVHRR SLKINKEWHK NRDLLAAFWD  120
KLLLQQAGKV MSFNDIMLKV YVLFLQHHLY ICIWCLNYPQ DISGSSVVSA LASSLCRPGV  180
WTLPQPYVKA GATLLDIIQA KPSRLPIPSQ ELFSILDDAS ERTFLCAGTA ESVQNYVFDG  240
ETAKNSLELK NLVALASFLF EQLLVKAWVA DKDAEALRYQ KLLVEEEEAA QKRRAVLLER  300
KKQKKRRQKE QKAREQYYGC SRDLNDYVDA VDRPTSAEAS GASSPSGSNA NSQDMPTTLD  360
SVEPPNKESD EDIEAQFDKS SEHKTQGDPP AVELQMVGAN GHLHVATNRL QAPKLQRASR  420
HGLHANLNLR TSKPEHTHKL GPSKERSQQN ANKVWTKKLK SSNDGESLRP PSLQEETRHQ  480
IEQNSGEVII GSIPVTLKSY IDQQQGSRPN ETKDTFSTEH DVLKKKNASE KLVKSNSLQP  540
GTNRVTSKHW RPVSRGETKN LPPVGRSNKD RDDDAIVSEA DDRTLSNGRS GQLQSLDNDG  600
CHNGKQFSSL SNDNAQQGFV PFSSKAAKEF LAKRWKEAIS GDHVKLVLSS GHEPTGQSDA  660
QHAPDPARRN APNQFGRTIH VARKLEKSVK FKYIPKQKVA V
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076143.10.0uncharacterized protein LOC105160463 isoform X1
RefseqXP_020548920.10.0uncharacterized protein LOC105160463 isoform X1
TrEMBLA0A4D9BNC70.0A0A4D9BNC7_SALSN; Uncharacterized protein
STRINGMigut.F00325.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37222128