PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100071620021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 152aa    MW: 17060.7 Da    PI: 8.0882
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100071620021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.26.6e-065678123
                                  EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                  +kC+dCgksF+++  L  H ++H
  Ote100071620021|100071620021 56 HKCSDCGKSFPTHQALGGHRSSH 78
                                  79**************9999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.56E-65482No hitNo description
PROSITE profilePS5015711.1155683IPR007087Zinc finger, C2H2
PfamPF139124.6E-95679IPR007087Zinc finger, C2H2
PROSITE patternPS0002805878IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MEEKDGSIDK KLSCKRKTRR GPLINPAILE KDKEEGEDNL PENQDSGDRV DNSDEHKCSD  60
CGKSFPTHQA LGGHRSSHNK TRLTIFNTNG SFGPVMNRRR KSXXXXXXXX XXXXXKKAST  120
SSSVAFDIDL NLPPKEDEDD VRGGRDGPIK FF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20502263