PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100068630231
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 359aa    MW: 40428.9 Da    PI: 7.1484
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100068630231genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-1171107237
                                   XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS
                        bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee.kvke 37 
                                   + +k+ rr+++NReAAr+sR+RKka++++Le  k k 
  Ote100068630231|100068630231  71 PTDKVMRRLAQNREAARKSRLRKKAYVQQLESsKLKL 107
                                   5789**************************9624444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-866113No hitNo description
SMARTSM003383.9E-470130IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.84172114IPR004827Basic-leucine zipper domain
PfamPF001701.9E-872108IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.42E-774110No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
PfamPF141445.7E-28160235IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MNSTSTQFVP SRRMGIYEPI HQMSMWGDFK GLDASSPIIL EVDPKLDNQS EDTSHGTVGP  60
SNKYDQETGK PTDKVMRRLA QNREAARKSR LRKKAYVQQL ESSKLKLLQL EQELGRARQQ  120
GLYSGSALDA SPLGYAGSTN PGIATFEMEY GHWVEEQDRQ ISDLRNALNT ETGELELRIF  180
VDGGMRHYFD LFTMKATAAK ADVFYLMSGM WKTSAERFFF WIGGFRPSEL LKVLLPHLEP  240
LSEQQRLDLG NLAQSCQQAE DALSQGMEKL QQFLGEAIAK QLGEGNYLPQ IGAAIEKLEA  300
LVRFVGQADH LRQETLQQIS RILTTRQAAR GLLALGEYFQ RLRALSSLWS SRPCDSSKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097616.10.0TGACG-sequence-specific DNA-binding protein TGA-1A isoform X3
SwissprotQ392371e-177TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A4D8ZE640.0A0A4D8ZE64_SALSN; Transcription factor TGA
STRINGMigut.L00088.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]