PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100058150021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family FAR1
Protein Properties Length: 494aa    MW: 54986.3 Da    PI: 8.7035
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100058150021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.13.3e-09781341989
                          FAR1  19 skkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                                    ++ k +g i++ +f Cs+e +++++ ++              C a+l+++k++ ++w+vtk++++HnH+ 
  Ote100058150021|100058150021  78 YTRDKPDGPIISWEFFCSREVFKRKNVES--------------CSAMLQIEKKDPDTWVVTKFVEDHNHST 134
                                   55667788889999999999998887776..............**************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-679134IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MDDGVVEVNT EKRKKSRETQ TQHGDDGAQN LTVVSTSQAD NGNRKLYVXX XXXXXXXXXX  60
XXXXXXXXXX XXXHVGQYTR DKPDGPIISW EFFCSREVFK RKNVESCSAM LQIEKKDPDT  120
WVVTKFVEDH NHSTVSPSKV HFLRPRRHFA GATKNALPET ADNQNDIMVS VDGNHLFYDS  180
NLAMQNASPI ETNPVARSMS HAETNSVGRT ASCMETNRAT MSSVPVMPLH YIQPSRVLCR  240
HILTVFTVTN VLKIPSQYIL KRWTRNARAG LLDEKDSRVE CVESLTIRFN NLCREALRFA  300
EEGAIVAETY SAAIDALEEG MKKISLVKKV VAKNKPPCQS SGNFQDTGSR KASVATPETI  360
PSLWPWQDAL PNRFNLNDAG VPVSDLSYPT LAPLAINRDG VLADNTVVLT CFKSMTWVIE  420
SKSLASKVAL INLKLQDYGK APSGETEVQF RLTRTTLEPM LKSMAYISQQ LSTPANKVAV  480
INLKAHASGL LSGF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078717.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_011078718.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_011078719.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_011078720.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_011078721.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_011078722.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_020549440.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
RefseqXP_020549441.11e-132protein FAR1-RELATED SEQUENCE 3 isoform X1
TrEMBLA0A4D9B7U01e-139A0A4D9B7U0_SALSN; Uncharacterized protein
STRINGMigut.N01873.1.p1e-121(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43522109