PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100057970011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ZF-HD
Protein Properties Length: 99aa    MW: 10709.9 Da    PI: 6.3774
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100057970011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.12.1e-333892659
                   ZF-HD_dimer  6 YkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                                  Y+eC+kNhAa++GghavDGCgE+mp++++  +++++l CaACgCHRnFHRre+e+
  Ote100057970011|100057970011 38 YRECMKNHAANMGGHAVDGCGEYMPAPSAVaTDPTTLICAACGCHRNFHRREPES 92
                                  **************************9999899*******************875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257742.0E-203889IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.4873889IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015667.2E-303889IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047706.4E-283890IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MDLDSSPTRS ADETEIDTPP RTHTQPIKNH HPPPPPPYRE CMKNHAANMG GHAVDGCGEY  60
MPAPSAVATD PTTLICAACG CHRNFHRREP ESPTTAITP
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the up-regulation of several stress-inducible genes. Acts as a transcriptional activator by interacting with MED25 and NAC proteins. Involved in increased drought tolerance. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:17233795}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by abscisic acid and by drought and salt stress. Not induced by cold. {ECO:0000269|PubMed:17233795}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070997.17e-40zinc-finger homeodomain protein 10
SwissprotQ9SEZ12e-27ZHD11_ARATH; Zinc-finger homeodomain protein 11
TrEMBLA0A2G9I2U86e-36A0A2G9I2U8_9LAMI; Uncharacterized protein
STRINGXP_004163533.14e-31(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10882485
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]