PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100057820241
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 321aa    MW: 34950.4 Da    PI: 7.3226
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100057820241genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP53.31.1e-16441681131
                           TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec 73 
                                   a+g+kdrhsk+ T++g+RdRR               d+LG+d++sk++eWLl +a  +i el+          + +s++++
  Ote100057820241|100057820241  44 ATGGKDRHSKVLTSRGLRDRR---------------DRLGYDQPSKAVEWLLSAAANSIAELPPMnspfplisDRPSEKKM 109
                                   5899*****************...............89***************************6777666433333444 PP

                           TCP  74 eaesssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmr 131
                                   +a+s   ++ + + +  aks+  s++s++s+ s l++++ +sr +ar+ra+er  e+ +
  Ote100057820241|100057820241 110 TAASGADQSMTLHVSTVAKSSVGSSSSENSKGSGLSISRsDSRIRARERAKERVLEREK 168
                                   555555555555555777788888888999998999999999*******9998766554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.7E-1646168IPR005333Transcription factor, TCP
PROSITE profilePS513698.5584790IPR017887Transcription factor TCP subgroup
PROSITE profilePS513708.863149168IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MENDEDEGTN RRSNSNAGGA ADPGGAIGGL YGWPSSRIVR VSRATGGKDR HSKVLTSRGL  60
RDRRDRLGYD QPSKAVEWLL SAAANSIAEL PPMNSPFPLI SDRPSEKKMT AASGADQSMT  120
LHVSTVAKSS VGSSSSENSK GSGLSISRSD SRIRARERAK ERVLEREKEN EEEFPSFSEL  180
RITNENSEQS AFYQRFPMDY LSSSLSSPPV TASPTPVAAP LLFTAAAEHH TELQPFSFTS  240
DHMVSSVNAA NPSAINRGTL QSNSSSLPSL QFPQNFFTGA ATPTGNHHQF FPELDDRLQL  300
YYGNAYGNEG RHSEPKRKEK P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842245.15e-81PREDICTED: transcription factor TCP2-like isoform X2
RefseqXP_012842244.19e-81PREDICTED: transcription factor TCP2-like isoform X1
TrEMBLA0A022QZI81e-82A0A022QZI8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24642252