PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100051290111
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family C2H2
Protein Properties Length: 213aa    MW: 22931.7 Da    PI: 8.2904
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100051290111genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012100116117
                                   EEETTTTEEESSHHHHH CS
                       zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                                   y+C+ C+++F++k +L+
  Ote100051290111|100051290111 100 YECKTCNRTFPSKTSLQ 116
                                   99*************98 PP

2zf-C2H211.20.0012125147123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++C++Cg  F +   L  H+r+H
  Ote100051290111|100051290111 125 HECSICGSEFGSGQALGGHMRRH 147
                                   78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.02E-799147No hitNo description
PfamPF139125.5E-499115IPR007087Zinc finger, C2H2
PROSITE profilePS501578.559100125IPR007087Zinc finger, C2H2
PROSITE profilePS501579.369125147IPR007087Zinc finger, C2H2
PfamPF139122.5E-11125149IPR007087Zinc finger, C2H2
PROSITE patternPS000280127147IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MFVKRKRTRR PRPASSTSSN GGAAGEFYNS LASSPTTSSG ISTTTEEDED MANCLILLAR  60
GNSPPQPEEI QTAAVENKFS SRKFAEMATA TAGKVGMFVY ECKTCNRTFP SKTSLQSDLN  120
KPKMHECSIC GSEFGSGQAL GGHMRRHRPG PAPCTTAKIP TSIESSNTTS SHEARDKARN  180
MLSLDLNLPA PPEEAEQQPR VVFAAAALVD CHY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089966.18e-76zinc finger protein ZAT5-like
TrEMBLA0A4D9AYX39e-93A0A4D9AYX3_SALSN; Uncharacterized protein
STRINGMigut.D02294.1.p3e-55(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480