PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100027860091
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 361aa    MW: 40456.1 Da    PI: 8.0236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100027860091genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-1077105533
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                                   k +rr+++NReAAr+sR+RKka++++Le+
  Ote100027860091|100027860091  77 KIQRRLAQNREAARKSRLRKKAYVQQLET 105
                                   789************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-473133IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-774117No hitNo description
PROSITE profilePS502179.01375119IPR004827Basic-leucine zipper domain
PfamPF001701.6E-777106IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-677117No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141443.6E-24149220IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MTTPTTQFAP SSRLGLYEPL HQISMWEDTF DGHISAGNGI SLIAEVEPKI DDKVEYGSDK  60
SLELAEENRA SRSISEKIQR RLAQNREAAR KSRLRKKAYV QQLETSRLKL AQLELELERA  120
RQQGMLMAVA NAHMGLCGTA NSDEQERKIS ELRNVLQTPI GDAELRLKVE SVLSHYCDLF  180
RMKRDAARVD AFSLVSGLWR TSVERFFLWI GGFKPSELIN QTANVETLKH SCMQAEDALT  240
QGMEKLQQTL AQTVSFLSPG HGSFCSQTAF ALENLESLES FINQVRQIVH PTLQVPAYIQ  300
HQTVLGRPSP TANSTAHVAY IDYATSSKRP GGVWRVFSAS AHVELALGGP LPTRVRMMVW  360
W
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097899.11e-156transcription factor TGA4 isoform X2
SwissprotQ392379e-91TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A4D8ZUK41e-164A0A4D8ZUK4_SALSN; Transcription factor TGA
TrEMBLA0A4D9B7381e-164A0A4D9B738_SALSN; Transcription factor TGA
STRINGMigut.C00214.1.p1e-155(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]