PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100025380051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family HSF
Protein Properties Length: 312aa    MW: 35421.8 Da    PI: 5.0464
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100025380051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind98.46.8e-31351291103
                                   HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                  HSF_DNA-bind   1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                   aFl+k+y+i++d++++++ sw + g+sf+++d+ +f+ ++Lp+yF+h+nfaSFv QLn YgF+k+  e++        we+
  Ote100025380051|100025380051  35 AFLTKTYQIVDDPATNSIASWGKYGDSFIIWDHIKFSAQILPNYFRHNNFASFVYQLNNYGFRKIGVEHQ--------WEY 107
                                   69****************************************************************9994........*** PP

                                   EESXXXXXXXXXXXXXXXXXXX CS
                  HSF_DNA-bind  82 khksFkkgkkellekikrkkse 103
                                    + +F+ +k +ll+++kr++++
  Ote100025380051|100025380051 108 GNTYFQMQKPHLLSNMKRRSEQ 129
                                   *******************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467854.22E-2831126IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.107.8E-3232126IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004153.7E-4332126IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004471.5E-2736126IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-173659IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-177486IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-178799IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MKETNCTFSS SGITQEMGGV GDAGGIGRSR SSPPAFLTKT YQIVDDPATN SIASWGKYGD  60
SFIIWDHIKF SAQILPNYFR HNNFASFVYQ LNNYGFRKIG VEHQWEYGNT YFQMQKPHLL  120
SNMKRRSEQN ATPRRQRNSS FSPEMMKDAI DESKLEIEKL KMQQLDIDFH ITALEQEAKS  180
ISIATKKMVA SWAVACGIIA KRRREQFENK NSDDEAAGKR KKVVEVSDKN GGRDLLVDEM  240
VKELTTPLSE IEPMNSADDD EGKVKSEMCS NYLDFCKVIM LDDDDEEVFE VGGGDHSKQV  300
QISKDFQDLI MD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d8k_B7e-21341263105Heat shock factor protein 2
5d8l_B7e-21341263105Heat shock factor protein 2
5d8l_D7e-21341263105Heat shock factor protein 2
5d8l_F7e-21341263105Heat shock factor protein 2
5d8l_H7e-21341263105Heat shock factor protein 2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830517.18e-51PREDICTED: heat stress transcription factor A-7a-like
TrEMBLA0A4D8Y8Q41e-74A0A4D8Y8Q4_SALSN; Heat shock transcription factor, other eukaryote
TrEMBLA0A4D9B3Y88e-75A0A4D9B3Y8_SALSN; Heat shock transcription factor, other eukaryote
STRINGMigut.H01517.1.p3e-50(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1687534