PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100023100011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 302aa    MW: 33854.7 Da    PI: 4.7593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100023100011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.3e-29140198259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k++e+s +dp +++itY+ eH h+
  Ote100023100011|100023100011 140 SDMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQMEQSCTDPGMFIITYTAEHSHS 198
                                   79*************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.4E-30125200IPR003657WRKY domain
PROSITE profilePS5081131.858134200IPR003657WRKY domain
SuperFamilySSF1182904.32E-25135200IPR003657WRKY domain
SMARTSM007741.7E-33139199IPR003657WRKY domain
PfamPF031066.5E-24141197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MSESVADMED WSLQAIVRGS SGDLGKIVMD MDGPDLFHQL LDQDFTGFPD ILEGSSTGSS  60
DELEELYKPF YPSTTPFPLP DQAVLEFQEQ NVAEDKPSHD QSSITSPVAS AAAVYTPKYK  120
KRKNQHKRVV IQVSAEGLSS DMWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQMEQS  180
CTDPGMFIIT YTAEHSHSQP TRRNSLAGTV RQKFPSPSGR PAKQEKSNFP EASQIAKMEA  240
VDAPPAIIKE EDAEEKPKEE NKEFMMSDFV FNEDFFSGLE EFDDFVSHAS AQQFPVRSCG  300
WV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-181412011880Disease resistance protein RRS1
5w3x_D7e-181412011880Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854209.11e-117PREDICTED: probable WRKY transcription factor 29 isoform X1
TrEMBLA0A0D5Y9B81e-138A0A0D5Y9B8_SALMI; WRKY protein
STRINGMigut.A00718.1.p1e-117(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335