PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os11g05480.1
Common NameLOC4349800, Os11g0152700, OSNPB_110152700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 485aa    MW: 52930.1 Da    PI: 6.663
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os11g05480.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.2e-12180208533
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                       k  rr+++NReAAr+sR+RKka+i++Le 
  LOC_Os11g05480.1 180 KTMRRLAQNREAARKSRLRKKAYIQQLES 208
                       6679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.887178222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-7178216No hitNo description
SuperFamilySSF579594.38E-7180213No hitNo description
PfamPF001706.7E-9180209IPR004827Basic-leucine zipper domain
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141442.1E-29259333IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009066anatomyanther
PO:0001004developmental stageanther development stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MGEASSSSGH PRQNPHVLGY GFHGAMPNSL PSANLFEQQG GANYFGELEE ALMQQVATLR  60
RTQQTATTTS TLHHGDTTPF STTATAAATA RPPPTLDIFP SWPMRSLHTP KEGSNVTADT  120
TDSESSSKNN SNQNASSDQH VLVGDMAGQF DQIPQQEQHK KMATNSPTHS SKTGKALDPK  180
TMRRLAQNRE AARKSRLRKK AYIQQLESSK LKLAQMEQDI HRARSQGLLL GAPGGNTSSG  240
AAMFDVDYAR WLEEDSQRMA ELHGGLHAHL PDSDLRAIVD DTLTHYDHLF NLKGMAAKAD  300
VFHLITGMWA TPAERCFLWM GGFRPSELLK TLTPQLDPLT EQQVVGICNL QQSSQQAEEA  360
LSQGLDQLHQ SLAETVAGGS PLDDPNVGSF MGHMAIALGQ LSNLEGFVIQ ADNLRQQTIH  420
QMHRILTVRQ AARCFLAIGE YHNRLRALSS LWASRPREIL VADEGNCGEL SIAAHPSESQ  480
YSAF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.491260.0callus| flower| panicle| root| seed
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329794350.0
Expression AtlasQ53Q70-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os11g05480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs11g05480
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0694110.0AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015617800.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotP239231e-129HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotO241601e-128TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLQ53Q700.0Q53Q70_ORYSJ; BZIP transcription factor
STRINGLOC_Os11g05480.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP64961119
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-136bZIP family protein
Publications ? help Back to Top
  1. Rice Chromosomes 11 and 12 Sequencing Consortia
    The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.
    BMC Biol., 2005. 3: p. 20
    [PMID:16188032]