PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os09g31390.2
Common NameLOC4347436, Os09g0489500, OSNPB_090489500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 522aa    MW: 57661.7 Da    PI: 7.238
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os09g31390.2genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11198241141
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                       e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  LOC_Os09g31390.2 198 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 241
                       6777999************************9633355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.5E-9196246No hitNo description
SMARTSM003385.8E-7198297IPR004827Basic-leucine zipper domain
PfamPF001702.7E-8199241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082200242IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.0E-7202243No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF141448.4E-28306380IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009066anatomyanther
PO:0001004developmental stageanther development stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MMSGSESQQE REHRQQQEMN ISFGMMMNHG HHHYGQHQQQ HHHHPPPSSS SSSSMHAAAA  60
SFIKEASAGA YDHLGELDQA LFMYLDHGSH AASHQEQRQT LNIFPSQPMH VEPSPKGEIS  120
LVLSPAAVGT KMARSPDHHH HHQQQAAAAM EELATGSRRQ DHHHLQHQPF AAEPAGINRD  180
VKPVTAKKDH RRGVSTGERD PKTLRRLAQN REAARKSRLR KKAYIQQLES SRIRLAQLEQ  240
ELHTARAQGV FFPGSGGLIG EGGSGKGVLL GGIDGVGGGG GGGLSSEAAM FDVEYGRWQE  300
EHHRLMYELR AALQQQLPEG ELQVYVESCL AHHDEVAAIK DGAIRGDVFH LISGVWMSPA  360
ERCFLWLGGF RPSEVIKMLV AHVEPLTEQQ IVGVYGLQQS ALETEEALTQ GLDALYQSLS  420
DTVVSDALSC PSNVANYMGQ MAVAINKLST LEGFVRQAEN LRQQTLHRLQ QVLTTRQMAR  480
SLLAVSDYFH RLRTLSSLWV TRPRHPPHDH QPPPHSAAPH T*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.538100.0callus| flower| panicle| root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329854190.0
Expression AtlasQ0J0P4-
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os09g31390.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs09g31390
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1002100.0AK100210.1 Oryza sativa Japonica Group cDNA clone:J023043A12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612566.10.0PREDICTED: transcription factor TGA2 isoform X2
SwissprotP432731e-113TGA2_ARATH; Transcription factor TGA2
TrEMBLQ0J0P40.0Q0J0P4_ORYSJ; Os09g0489500 protein
STRINGLOC_Os09g31390.10.0(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-130bZIP family protein