PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os09g10840.1
Common NameLOC4346610, Os09g0280500, OSNPB_090280500, P0651G05.17
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 468aa    MW: 51343.1 Da    PI: 8.1739
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os09g10840.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.7e-11181209533
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                       k  rr+++NReAAr+sR+RKka+i++Le 
  LOC_Os09g10840.1 181 KTLRRLAQNREAARKSRLRKKAYIQQLES 209
                       6789***********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-6177239IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.795179221IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-8179221No hitNo description
SuperFamilySSF579592.06E-7181215No hitNo description
PfamPF001707.5E-9181210IPR004827Basic-leucine zipper domain
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
PfamPF141444.9E-27266338IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009005anatomyroot
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGGSREEDRQ HHNHLPSELP LGFRSSSPTT MIASSSMSKE SSNYDMADFD QASLFLYLDS  60
HDQQSIQEQR QTLNIFPSQP MHVADPAHEA KSAGVAMAML PNGNQLQVLP SHPSKKPDQQ  120
GGQKINSSVP TNPPGPNLPL PNSAKDNKNS SLIKKEGSSS GKGATTSNDP EREGRRTLDP  180
KTLRRLAQNR EAARKSRLRK KAYIQQLESS RIRLSQLEQQ VHVARVQGAM LGAGDQHQGL  240
PSGPSAASLF DLEYGRWVEE HSKLIFQLRA ALNEQMADSQ LQVFVNGAMA QHDELLSLKG  300
AIARADIFHL LCGVWATPAE RCFLWLGGFR PSEAIKVMLK QVEPLSEGQL MSIYELQQAA  360
KGTEDALSHA MDGLQQSLSD TVAAPDVAAA GGFMGHMSLA MNKISAMEDI VRQADGLRQQ  420
TLHKLQHMLT IRQAARCFVA ISDYFHRLRA LSTLWVARPR PEEGPAM*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.494970.0callus| leaf| panicle| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329921970.0
Expression AtlasQ6H434-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os09g10840.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs09g10840
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1069880.0AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651203.10.0PREDICTED: transcription factor TGA2 isoform X2
SwissprotQ415581e-110HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLQ6H4340.0Q6H434_ORYSJ; Os09g0280500 protein
STRINGLOC_Os09g10840.20.0(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-126bZIP family protein