PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os07g08420.1
Common NameLOC4342570, OJ1014_E09.42, Os07g0182000, OsJ_23334, OSNPB_070182000
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 437aa    MW: 46491 Da    PI: 4.5868
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os07g08420.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-14234289156
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                       ++e+k+ +rk++NRe+ArrsR RK a+++ Lee v  L  eN++L  +l   ++++
  LOC_Os07g08420.1 234 DEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVSLLRVENSSLLRRLADANQKY 289
                       579****************************************9998777666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-10234288No hitNo description
SMARTSM003382.7E-13234298IPR004827Basic-leucine zipper domain
PfamPF001706.4E-11235289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932236288IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-8238288No hitNo description
PfamPF124981.5E-26305410IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009089anatomyendosperm
PO:0007042developmental stagewhole plant fruit formation stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MEHVFAVDEI PDPLWAPPPP VQPAAAAGVD DVGAVSGGGL LERCPSGWNL ERFLEELDGV  60
PAPAASPDGA AIYPSPMPAA AAEAAARWSR GYGDREAVGV MPMPAAALPA APASAAMDPV  120
EYNAMLKRKL DEDLATVAMW RASGAIHSES PLGNKTSLSI VGSILSSQKC IEGNGILVQT  180
KLSPGPNGGS GPYVNQNTDA HAKQATSGSS REPSPSEDDD MEGDAEAMGN MILDEEDKVK  240
KRKESNRESA RRSRSRKAAR LKDLEEQVSL LRVENSSLLR RLADANQKYS AAAIDNRVLM  300
ADIEALRAKV RMAEESVKMV TGARQLHQAI PDMQSPLNVN SDASVPIQNN NPMNYFSNAN  360
NAGVNSFMHQ VSPAFQIVDS VEKIDPTDPV QLQQQQMASL QHLQNRACGG GASSNEYTAW  420
GSSLMDANEL VNMELQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.15010.0flower| panicle
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1160113590.0
Expression AtlasQ6ZLB0-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os07g08420.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs07g08420
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0534720.0AB053472.1 Oryza sativa mRNA for RISBZ1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645416.10.0PREDICTED: regulatory protein opaque-2
TrEMBLQ6ZLB00.0Q6ZLB0_ORYSJ; Os07g0182000 protein
TrEMBLQ9AR010.0Q9AR01_ORYSA; RISBZ1
STRINGLOC_Os07g08420.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18391639
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-21basic leucine zipper 25