PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os06g10880.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 219aa    MW: 23829.5 Da    PI: 9.9601
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os06g10880.3genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.81.3e-14138190556
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.eleelkkev 56 
                       +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++  +L+k ++e+++k+ 
  LOC_Os06g10880.3 138 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQKkQVEMIQKQN 190
                       79*************************************99741455555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-13134199IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.657136181IPR004827Basic-leucine zipper domain
PfamPF001708.0E-12138191IPR004827Basic-leucine zipper domain
CDDcd147076.97E-23138185No hitNo description
Gene3DG3DSA:1.20.5.1705.4E-15138194No hitNo description
SuperFamilySSF579591.63E-10138188No hitNo description
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MELPADGSAL ARQGSIYSLT FDEFQSALGS AEKDFGSMNM DELLRNIWTA EESQALFPGS  60
NVVAPAMQLA NGMLPGVVGV APGAAAAMTV AAPATPVVLN GLGKVEGGDL SSLSPVPYPF  120
DTALRVRKGP TVEKVVERRQ RRMIKNRESA ARSRARKQAY IMELEAEVAK LKEQKAELQK  180
KQVEMIQKQN DEVMERITQQ LGPKAKRFCL RRTLTGPW*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.542990.0callus| flower| leaf| panicle| root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329883970.0
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os06g10880.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs06g10880
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU5527830.0GU552783.1 Oryza sativa Japonica Group putative expressed bZIP transcription factor mRNA, complete cds.
GenBankAK1053120.0AK105312.1 Oryza sativa Japonica Group cDNA clone:001-117-D06, full insert sequence.
GenBankAK1031880.0AK103188.1 Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015693494.11e-128PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q41e-42AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLJ3MCA71e-134J3MCA7_ORYBR; Uncharacterized protein
STRINGOB06G16510.11e-134(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.22e-33abscisic acid responsive elements-binding factor 3