PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os05g37170.6
Common NameOs05g0443900, OSNPB_050443900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 433aa    MW: 48179.2 Da    PI: 6.1908
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os05g37170.6genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.15.9e-11122151433
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                        k err+++NReAAr+sR+RKka++++Le+
  LOC_Os05g37170.6 122 AKTERRLAQNREAARKSRLRKKAYVQQLET 151
                       799*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-6119195IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.381121165IPR004827Basic-leucine zipper domain
PfamPF001709.0E-8122152IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6123166No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-7123152No hitNo description
PROSITE patternPS000360126141IPR004827Basic-leucine zipper domain
PfamPF141443.8E-29204278IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0025281anatomypollen
PO:0001015developmental stageK second mitotic division stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MYAAAGYLAA RPPTLEIFPS WPMSHLQEPY SQNSQSVGST TDSSSAQNTM SQAELVSPAS  60
MRSDSGQEQQ QQEVLMVTID DYNYKQGLGA AIATAPSFQQ HAGGLDMRKH GSTRKDGKLL  120
DAKTERRLAQ NREAARKSRL RKKAYVQQLE TSRIRLQQIE QELQRARSQG LFPGGCSAPG  180
DMSSGAVMFD MDYTRWIDDD SKCMAELQGA LQAQLPDGNL GAIVEECMRH YDELFHLRAV  240
LASSDVFHLM TGMWAAPAER CFLWMAGFRP SEILKMLIPQ LDPLTEQQLM GMCSLQQSSE  300
QTEEALAQGL HQLHQSLADA VGGGPLNDGA DVANYTGLMA LALGRLENLE SFYRQADNLR  360
QETLHHMRRI LTTRQTARCF LSIGEYNRRL RALSSLWASR PRENFIATEN VSPTGTEFQV  420
IQQSQQNQFS GF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.234690.0callus| leaf| panicle| seed
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329947290.0
Expression AtlasQ0DHT1-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os05g37170.6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs05g37170
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1095200.0AK109520.1 Oryza sativa Japonica Group cDNA clone:002-113-G01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639064.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X7
SwissprotO241601e-114TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLQ0DHT10.0Q0DHT1_ORYSJ; Os05g0443900 protein (Fragment)
TrEMBLQ6F2N00.0Q6F2N0_ORYSJ; Putative bZIP protein
STRINGLOC_Os05g37170.10.0(Oryza sativa Japonica Group)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-137bZIP family protein