PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os03g47200.1
Common NameOs03g0675400, Os03g47200, OSNPB_030675400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 157aa    MW: 17150.6 Da    PI: 12.3704
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os03g47200.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35e-115094347
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                      + +r rrk++NRe+ArrsR+RK+  ++eL+ +++ L   N++L+ 
  LOC_Os03g47200.1 50 DERRLRRKISNRESARRSRARKQRHLDELRARAERLRRCNRELAA 94
                      66899***********************************99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.3E-84295No hitNo description
SMARTSM003384.4E-648126IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2085095IPR004827Basic-leucine zipper domain
PfamPF001701.6E-75293IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-85296No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MPLMHLLAPP AQAFVVAPPR VAPAFDGAAA PPREDDPAAD QPPEREADAD ERRLRRKISN  60
RESARRSRAR KQRHLDELRA RAERLRRCNR ELAARGHAAR GRAGLVRLAN AWLRAEAAAL  120
TRRLAAARRA IALGQLYRPA AAAAAASGRS SRRSPR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16471RRSRARKQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasQ9FRG2
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os03g47200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs03g47200
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0798300.0AC079830.9 Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLQ9FRG22e-98Q9FRG2_ORYSJ; BZIP transcription factor family protein
STRINGLOC_Os03g47200.17e-98(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2721145