PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os03g13614.3
Common NameLOC4332201, Os03g0239400, OsJ_10083, OSNPB_030239400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 384aa    MW: 41058.3 Da    PI: 9.8085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os03g13614.3genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.63.6e-20299361163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkr++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l++++ +l+se+
  LOC_Os03g13614.3 299 ERELKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQEKCNSLTSEN 361
                       89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.7E-291100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-17139267No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-15294357No hitNo description
PfamPF001707.1E-18299361IPR004827Basic-leucine zipper domain
SMARTSM003381.0E-19299363IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.587301364IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-9302358No hitNo description
CDDcd147021.19E-21304355No hitNo description
PROSITE patternPS000360306321IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009049anatomyinflorescence
PO:0001083developmental stageinflorescence development stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MGKGEVATRS KSQKSSATQN EQSTPTNPPT AYPDWSQFQA YYNPAGTAPM TPPGFFHPNV  60
APSPQGHPYM WGPQMMPPYG TPPPYAAMYA QGTPYQQAPM LPGSHPYNPY PGQSPNGTVQ  120
TPTSAGGTET DKSGKSKRKT PLKRSKGSLG NLDVVATKNK KAPAKPSASS SNEGSSHSES  180
GSGSSSEGSS TNSKSGSRTK DGSEHGQGND ASNKGATAQS SAVEPVQAST GPVVLNPMMP  240
YWPVPPPMAG PATGVNMGMD YWGTPTSVPM HNKVIAAPAS APSSNSRDVV LSDPAIQDER  300
ELKRQKRKQS NRESARRSRL RKQAEWEEVA NRADLLKQEN SSLKEELKQL QEKCNSLTSE  360
NTTLHEKLKE LEGEKSNGNW YKE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1315321RRSRLRK
2315322RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.196340.0callus| flower| leaf| panicle| seed| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329765810.0
Expression AtlasQ10PC3-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os03g13614.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs03g13614
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0665630.0AK066563.1 Oryza sativa Japonica Group cDNA clone:J013071G08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632857.10.0PREDICTED: transcription factor HBP-1a isoform X1
RefseqXP_015632858.10.0PREDICTED: transcription factor HBP-1a isoform X1
RefseqXP_015632859.10.0PREDICTED: transcription factor HBP-1a isoform X1
RefseqXP_015632860.10.0PREDICTED: transcription factor HBP-1a isoform X1
RefseqXP_015632861.10.0PREDICTED: transcription factor HBP-1a isoform X1
SwissprotQ501B29e-84BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A0D3FG050.0A0A0D3FG05_9ORYZ; Uncharacterized protein
TrEMBLA0A0E0GBH90.0A0A0E0GBH9_ORYNI; Uncharacterized protein
TrEMBLA0A0E0NS760.0A0A0E0NS76_ORYRU; Uncharacterized protein
TrEMBLA2XED40.0A2XED4_ORYSI; Putative uncharacterized protein
TrEMBLI1P9B20.0I1P9B2_ORYGL; Uncharacterized protein
TrEMBLQ10PC30.0Q10PC3_ORYSJ; Os03g0239400 protein
STRINGLOC_Os03g13614.10.0(Oryza sativa Japonica Group)
STRINGBGIOSGA011142-PA0.0(Oryza sativa Indica Group)
STRINGORGLA03G0095800.10.0(Oryza glaberrima)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-53basic region/leucine zipper transcription factor 16