PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os02g10760.1
Common NameLOC4328653, Os02g0202000, OsJ_05797, P0419A09.30, WTF1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 206aa    MW: 22444.2 Da    PI: 9.3301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os02g10760.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19654153
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                      ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  LOC_Os02g10760.1  6 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 54
                      59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.55E-32666No hitNo description
PROSITE profilePS5103221.878764IPR001471AP2/ERF domain
SMARTSM003805.6E-40770IPR001471AP2/ERF domain
PfamPF008477.0E-12751IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-20765IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.5E-33765IPR001471AP2/ERF domain
PRINTSPR003671.2E-10819IPR001471AP2/ERF domain
PRINTSPR003671.2E-103046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009071anatomyanther wall tapetum
PO:0001013developmental stageH late unicellular microspore stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MVQPKKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDEA AVLMSGRNAK  60
TNFPVQRNST GDLATAADQD ARSNGGSRNS SAGNLSQILS AKLRKCCKAP SPSLTCLRLD  120
PEKSHIGVWQ KRAGARADSN WVMTVELNKE VEPTEPAAQP TSTATASQVT MDDEEKIALQ  180
MIEELLSRSS PASPSHGEGE GSFVI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-17669468ATERF1
2gcc_A3e-17669468ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.798100.0leaf| panicle
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO2975987820.0
Expression AtlasQ6Z786-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os02g10760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs02g10760
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ4683870.0DQ468387.1 Oryza sativa (japonica cultivar-group) wax transcription factor 1 (WTF1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627194.11e-152PREDICTED: ethylene-responsive transcription factor WIN1
SwissprotQ9XI333e-79WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0E0NY081e-151A0A0E0NY08_ORYRU; Uncharacterized protein
TrEMBLQ6Z7861e-151Q6Z786_ORYSJ; Os02g0202000 protein
STRINGLOC_Os02g10760.11e-151(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-64ERF family protein