PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os02g09830.1
Common NameOs02g0191600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 171aa    MW: 19291.7 Da    PI: 6.5184
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os02g09830.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.72.2e-1274121552
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                       ++ rr+ +NRe+ArrsR RK+ +++eL   v eL   N++L  el+++
  LOC_Os02g09830.1  74 RKKRRLVSNRESARRSRVRKQRRLDELSSQVSELRDTNQRLLVELNHM 121
                       78899************************************9887764 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-1067121No hitNo description
SMARTSM003383.9E-970134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.13972135IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-1074125No hitNo description
PfamPF001702.1E-974120IPR004827Basic-leucine zipper domain
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0020039anatomyleaf lamina
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MQHDAISNIA YHPSMDFTSF FLPQTDAYSH DLSALLDMAV VDPYISCNGS SITMIPVTED  60
EANAQPMNHG NDERKKRRLV SNRESARRSR VRKQRRLDEL SSQVSELRDT NQRLLVELNH  120
MISKHARIVR ENSQLREEAS DLQRKLSEMK MEDAEVAAAA AAAPRTLEVA *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18692RRSRVRK
28693RRSRVRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.583770.0panicle
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasQ0E366
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os02g09830.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs02g09830
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU4069130.0CU406913.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C002J11, full insert sequence.
GenBankBT1293890.0BT129389.1 Oryza sativa clone RRlibA00076 mRNA sequence.
GenBankBT1293470.0BT129347.1 Oryza sativa clone RRlibA00066 mRNA sequence.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankAP0057850.0AP005785.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0453H10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624742.11e-122PREDICTED: basic leucine zipper 43
TrEMBLA0A0E0NB211e-122A0A0E0NB21_ORYRU; Uncharacterized protein
TrEMBLQ0E3661e-122Q0E366_ORYSJ; Os02g0191600 protein
TrEMBLQ69M021e-122Q69M02_ORYSJ; Uncharacterized protein
STRINGLOC_Os02g09830.11e-122(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1690533
MonocotsOGMP127422735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-12basic leucine-zipper 42