PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os02g03580.1
Common NameLOC4328173, Os02g0128200, OsJ_05225, OSNPB_020128200, P0482F12.32, P0576F08.5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 348aa    MW: 37079.4 Da    PI: 5.5717
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os02g03580.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.41.2e-21244306163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elk+++rkq+NRe+ArrsR+RK+ae+eeL  ++++L aeN++L+ ele++kke+++l s++
  LOC_Os02g03580.1 244 ERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHN 306
                       89*********************************************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.2E-20123226No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-15242303No hitNo description
SMARTSM003381.8E-18244308IPR004827Basic-leucine zipper domain
PfamPF001701.9E-19244306IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.794246309IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-10247304No hitNo description
CDDcd147025.36E-25249299No hitNo description
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009030anatomycarpel
PO:0007130developmental stagesporophyte reproductive stage
PO:0007606developmental stagegynoecium development stage
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MGTNDPGTPS KATKASEPEQ SPATTSGTTA PVYPEWPGFQ AYSAIPPHGF FPPPVAASPQ  60
AHPYMWGAQP MVPPYGTPPP YMMYPPGTVY AHPSTPGVHP FNHYPMLANG NVETAGTAPG  120
ASEINGKNEL GRTSGPSANG ITSHSESGSE SESEGSDANS QNDSHSKEND VKEDGSSQNG  180
ISHTALNQNM SMAPTQTGVV IGGVAPTTNL NIGMDYWGAA GSSPVPAMHG KASSGSVRGE  240
QWDERELKKQ KRKQSNRESA RRSRLRKQAE CEELSVRADN LRAENSSLRA ELERIKKEYE  300
ALLSHNASLK EKLEGNSDSI PYMNEQNDTN GTHQKQQDSD AQPNDAP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260266RRSRLRK
2260267RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.264910.0callus| flower| leaf| panicle| root| seed| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO379885640.0
Expression AtlasQ6Z2L2-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os02g03580.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs02g03580
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1120090.0AK112009.1 Oryza sativa Japonica Group cDNA clone:006-209-B12, full insert sequence.
GenBankAK1119010.0AK111901.1 Oryza sativa Japonica Group cDNA clone:J023076M20, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015626323.10.0PREDICTED: transcription factor HBP-1a
RefseqXP_015626324.10.0PREDICTED: transcription factor HBP-1a
SwissprotP239221e-149HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLB8AH000.0B8AH00_ORYSI; Putative uncharacterized protein
TrEMBLQ6Z2L20.0Q6Z2L2_ORYSJ; Os02g0128200 protein
STRINGBGIOSGA007448-PA0.0(Oryza sativa Indica Group)
STRINGLOC_Os02g03580.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-58basic region/leucine zipper transcription factor 68