PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI12G03660.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 495aa    MW: 53530 Da    PI: 7.5403
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI12G03660.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.78e-11191217733
                      HHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   7 errkqkNReAArrsRqRKkaeieeLee 33 
                       rr+++NReAAr+sR+RKka+i++Le 
  ORUFI12G03660.1 191 MRRLAQNREAARKSRLRKKAYIQQLES 217
                      69***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-7183231No hitNo description
SMARTSM003381.8E-5184260IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128187231IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-6189225No hitNo description
PfamPF001701.4E-7190218IPR004827Basic-leucine zipper domain
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
PfamPF141445.1E-29269343IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MPQTGRMGEA RRGQNPHHVL GYGFHGTTLP NSMASANLFE QGGGGGGGAA YFGELEEALV  60
HQVATLRRRA QQTATTTTSH HGHTTPFSTA AAAATATATA RPPATLDIFP SWPMRRSSLP  120
TPKDGCSNVT ADTTDSESSS KNNGDQGAAA ADMASQFDQI PQQQQKQHKK MAASSTHSDH  180
RMTKTLDPKI MRRLAQNREA ARKSRLRKKA YIQQLESSKL RLAQMEQDLE RARSQGLLLG  240
GSPGGNTSAG AAMFDAEYGR WLEDGGRRMA ELHGGLHAHL PDGDLRAIVD DALAHYDELF  300
RLRAAAAKAD VFHLITGTWA TPAERCFLWM GGFQPSDLLK TVAPQLDPLT EQQVVGICSL  360
QQSSQQAEEA LSQGLEQLHQ SLAETVANGG SVVNEASLGS FMGYMALALG KLSNLEGFVI  420
QADNLRQQTL HQMHRILTIR QAARCFLAIG EYHNRLRALS SLWASRPREI LVADEGNCGE  480
LSIAAQPSES QFSAF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ7509290.0FJ750929.1 Oryza sativa clone KCS115G01 DNA-binding protein mRNA, complete cds.
GenBankAK1016200.0AK101620.1 Oryza sativa Japonica Group cDNA clone:J033052J02, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015619722.10.0PREDICTED: transcription factor TGA6
SwissprotO241601e-126TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0E0RDX10.0A0A0E0RDX1_ORYRU; Uncharacterized protein
STRINGBGIOSGA036617-PA0.0(Oryza sativa Indica Group)
STRINGLOC_Os12g05680.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-128bZIP family protein