PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G27880.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 318aa    MW: 34661.8 Da    PI: 5.6175
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G27880.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.6e-105089544
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                     k  rr+++NReAAr+sR+RKka++++Le    +L +  ++
  ORUFI07G27880.1 50 KTMRRLAQNREAARKSRLRKKAYVQQLESSKLKLAQLEQE 89
                     7789************************855444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-646109IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.454892IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-75093No hitNo description
CDDcd147081.48E-2250102No hitNo description
PfamPF001703.7E-75091IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-85195No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
PfamPF141449.5E-34132207IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MADASSRTDT SIVVDNDDKN HQLENGHSGA VMASNSSDRS DRSDKLMDQK TMRRLAQNRE  60
AARKSRLRKK AYVQQLESSK LKLAQLEQEL QKARQQGIFI SSSGDQTHAM SGNGALTFDL  120
EYTRWLEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEVFKVKGVA AKADVFHILS  180
GMWKTPAERC FLWLGGFRPS ELLKLLANHL EPLTEQQLLG LNNLQESSQQ AEDALSQGME  240
ALQQSLADTL AGSLGSSGSS GNVANYMGQM AMAMGGQPAT ADIASNATNS DDPASLACSS  300
CHTRLLFTLA CFEFAVAC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ8588070.0HQ858807.1 Oryza sativa Japonica Group isolate UT1185 bZIP transcription factor mRNA, partial cds.
GenBankCT8311860.0CT831186.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117D18, full insert sequence.
GenBankAB0512950.0AB051295.1 Oryza sativa OsNIF2 mRNA for bZIP transcription factor, complete cds.
GenBankAK1004400.0AK100440.1 Oryza sativa Japonica Group cDNA clone:J023089F16, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015647505.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X2
RefseqXP_015647506.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X2
SwissprotP239231e-145HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-144HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0E0QCZ50.0A0A0E0QCZ5_ORYRU; Uncharacterized protein
STRINGORGLA07G0213300.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-103TGACG motif-binding factor 6