PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G05040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 414aa    MW: 44354.7 Da    PI: 4.7609
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G05040.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.22.1e-14212267156
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      ++e+k+ +rk++NRe+ArrsR RK a+++ Lee v  L  eN++L  +l   ++++
  ORUFI07G05040.1 212 DEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVSLLRVENSSLLRRLADANQKY 267
                      579****************************************9998777666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-10212266No hitNo description
SMARTSM003382.7E-13212276IPR004827Basic-leucine zipper domain
PfamPF001706.0E-11213267IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932214266IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-9216266No hitNo description
PfamPF124981.4E-26283388IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MEHVFAVDEI PDPLWAPPPP RCPSGWNLER FLEELDGVPA PAASPDGAAI YPSPMPAAAA  60
EAAARGSRGY GDREAVGVMP MPAAALPAAP ASAAMDPVEY NAMLKRKLDE DLATVAMWRA  120
SGAIHSESPL GNKTSLSIVG SILSSQKCIE GNGILVQTKL SPGPNGGSGP YVNQNTDAHA  180
KQATSGSSRE PSPSEDDDME GDAEAMGNMI LDEEDKVKKR KESNRESARR SRSRKAARLK  240
DLEEQVSLLR VENSSLLRRL ADANQKYSAA AIDNRVLMAD IEALRAKVRM AEESVKMVTG  300
ARQLHQAIPD MQSPLNVNSD ASVPIQNNNP MNYFSNANNA GVNSFMHQVS PAFQIVDSVE  360
KIDPTDPVQL QQQQMASLQH LQNRACGGGA SSNGYTAWGS SLMDANELVN MELQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0534720.0AB053472.1 Oryza sativa mRNA for RISBZ1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645416.10.0PREDICTED: regulatory protein opaque-2
TrEMBLA0A0E0Q4V40.0A0A0E0Q4V4_ORYRU; Uncharacterized protein
STRINGBGIOSGA024713-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.13e-21basic leucine zipper 25