PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI06G10770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 509aa    MW: 56197.2 Da    PI: 6.2737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI06G10770.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.53.3e-331492881128
              NAM   1 lppGfrFhPtdeelvveyLkkk..vegkk...leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 
                      lp+G++F+Ptd+el+++ L+k+  v +k    +++  +i++v+    i++++P++Lp  vk++ +  +fF+++ k+y+tg rk+r+++     +
  ORUFI06G10770.1 149 LPRGVKFDPTDQELLWHLLAKHgkVGAKAhpfIDE--FIPTVEeddgICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGIRKRRKINtgdlaD 239
                      699************99998862255555444233..2444422245**********.677888899******************866334446 PP

              NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       +W++tgk+k+v++ +g++ g+kk++v+y  + +  k+ekt+Wvmh+y+l
  ORUFI06G10770.1 240 VRWHKTGKTKPVVV-DGKHLGCKKIMVLYmsTMKGGKPEKTNWVMHQYHL 288
                      67************.999***********6534666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-38134307IPR003441NAC domain
PROSITE profilePS5100530.219149307IPR003441NAC domain
PfamPF023651.8E-14150288IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MDAVQPSNAQ YKPRAPGLCA GVSVVSSPPP SPVNSGSKKK KENLGRPTTH RLSTSISIRF  60
SLQVRRLALA LVGSLVGRGG LRLPAGGAGA AMTGTSWIID SHRIASKIKN ASGSVDASKH  120
KWVSNPTKAC PRCNHIIDNS DVVHQWPGLP RGVKFDPTDQ ELLWHLLAKH GKVGAKAHPF  180
IDEFIPTVEE DDGICYTHPQ KLPGVKQDGS VSHFFHRTFK AYNTGIRKRR KINTGDLADV  240
RWHKTGKTKP VVVDGKHLGC KKIMVLYMST MKGGKPEKTN WVMHQYHLGT GEDEVEGQYV  300
VSKLFFQQQF KPGEKNAQDL TSADALESIV AEDLPNIPPL PLEEHVFTNQ ELEVLEKSET  360
ITDQGKETSE INNEDNAVED VAHMATEKPE DRDNPSSQDP KWWEGESQFL LDSQQLAENL  420
AICDEFLQSQ SQTSCGGGDD EPDKIKPRLA VYAQLPVEDL KKDLEECQRL DPSDGTNLEL  480
ENASEFRLSQ IEFSQDSFTT AWAGGKVID
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0604340.0AK060434.1 Oryza sativa Japonica Group cDNA clone:001-011-B08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640881.10.0PREDICTED: NAC domain-containing protein 8
SwissprotQ6NQK21e-142NAC8_ARATH; NAC domain-containing protein 8
TrEMBLA0A0E0PW690.0A0A0E0PW69_ORYRU; Uncharacterized protein
STRINGBGIOSGA022664-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-141NAC family protein