PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI02G34130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TCP
Protein Properties Length: 411aa    MW: 41377.5 Da    PI: 9.8129
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI02G34130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.37.8e-40662421137
              TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 
                      aa+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++     
  ORUFI02G34130.1  66 AAPKRSSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSAPahlra 159
                      689*******************************************************************999878888888886666688888 PP

              TCP  89 ...............................kaaksaakskksqksaasalnlakesrakarar..are.rtrekmriknkln 137
                                                     ++++s  +   + +s +  l+++ + +a a a   +r+ r++++m+++++++
  ORUFI02G34130.1 160 lpspaaaarfgsradawdrvvslgfpsegpaSSSSSPSPLLLNFHSGSVGLDVQPSPSAAAAAAdlSRKrRWEQEMQQQQQQQ 242
                      99999999999999999999999999999964444444777777777777888775554444444666657777777776655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.7E-4372242IPR005333Transcription factor, TCP
PROSITE profilePS5136927.86173127IPR017887Transcription factor TCP subgroup
Gene3DG3DSA:2.60.120.102.3E-4232258IPR014710RmlC-like jelly roll fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0031347Biological Processregulation of defense response
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MTMDVAGDAG GGRRPNFPLQ LLEKKEEQPC SSSAAGGGTG PSSAGGNGNN GSGPGGAGGE  60
MQLRKAAPKR SSTKDRHTKV EGRGRRIRMP ALCAARVFQL TRELGHKTDG ETIEWLLQQA  120
EPAVIAATGT GTIPANFTSL NISLRSSGSS LSAPAHLRAL PSPAAAARFG SRADAWDRVV  180
SLGFPSEGPA SSSSSPSPLL LNFHSGSVGL DVQPSPSAAA AAADLSRKRR WEQEMQQQQQ  240
QQQQQQQQQQ QQQYQQQMAG YTQSQMPGTV WMVPSNSTQG GGPSGGGGGG GGGSGESIWT  300
FPQMSSAAAA AAVYRGSVPS GLHFMNFPAP MALLPGQQLG LGPVGGGGGG GGGGEGHMGI  360
LAALNAYRTQ AATDAAGQQG GGGGGGGSSQ QQHGGGGGGG ERHQSISTSD S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1283293SGGGGGGGGGS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankAP0058480.0AP005848.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11.
GenBankAP0057330.0AP005733.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624016.10.0PREDICTED: transcription factor TCP14
SwissprotQ93Z004e-57TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A0E0NKY30.0A0A0E0NKY3_ORYRU; Uncharacterized protein
STRINGORGLA02G0279800.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.11e-44TCP family protein